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Description : Unknown function
Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU7Hr1G107100.1 | |
| Cluster | HCAA Clusters: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.A01134.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G109300 | No alias | tubulin beta chain 3 | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G219300 | No alias | tubulin beta-1 chain | 0.03 | Orthogroups_2024-Update | |
| LOC_Os06g46000 | No alias | tubulin/FtsZ domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Mp1g20730.1 | No alias | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | Orthogroups_2024-Update | |
| PSME_00001846-RA | No alias | (q40665|tbb3_orysa : 816.0) Tubulin beta-3 chain (Beta-3... | 0.02 | Orthogroups_2024-Update | |
| Pp1s218_7V6 | No alias | tubulin beta | 0.02 | Orthogroups_2024-Update | |
| Pp1s252_101V6 | No alias | tubulin beta | 0.03 | Orthogroups_2024-Update | |
| Pp1s93_136V6 | No alias | tubulin beta | 0.03 | Orthogroups_2024-Update | |
| Seita.4G265500.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G540900.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G224900.1 | No alias | beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Predicted GO |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
| CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
| CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
| MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| CC | GO:0043189 | H4/H2A histone acetyltransferase complex | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| CC | GO:1902493 | acetyltransferase complex | IEP | Predicted GO |
| CC | GO:1902562 | H4 histone acetyltransferase complex | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018316 | Tubulin/FtsZ_2-layer-sand-dom | 29 | 150 |
| No external refs found! |