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  5. HORVU7Hr1G107770.4

HORVU7Hr1G107770.4


Description : siRNA-integrating factor *(AGO)


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G107770.4
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AC199001.3_FG005 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
Bradi1g28260 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Orthogroups_2024-Update
Bradi1g54977 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
Bradi3g60697 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
Potri.014G159400 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
Sobic.001G136150.1 No alias Unknown function 0.02 Orthogroups_2024-Update
evm.model.contig_2082.8 No alias (at1g48410 : 352.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032472 ArgoL2 16 61
IPR003165 Piwi 162 476
No external refs found!