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  5. HORVU7Hr1G108780.2

HORVU7Hr1G108780.2


Description : methyltransferase component *(Nop1/fibrillarin) of snoRNP rRNA methylation complex


Gene families : OG_42_0002666 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002666_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G108780.2
Cluster HCAA Clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
171051 No alias fibrillarin 2 0.05 Orthogroups_2024-Update
At5g52470 No alias Probable mediator of RNA polymerase II transcription... 0.05 Orthogroups_2024-Update
Bradi1g32010 No alias fibrillarin 1 0.09 Orthogroups_2024-Update
Bradi3g55810 No alias fibrillarin 2 0.08 Orthogroups_2024-Update
Brara.A01555.1 No alias methyltransferase component *(Nop1/fibrillarin) of... 0.06 Orthogroups_2024-Update
Brara.H01568.1 No alias methyltransferase component *(Nop1/fibrillarin) of... 0.04 Orthogroups_2024-Update
Brara.K00184.1 No alias methyltransferase component *(Nop1/fibrillarin) of... 0.03 Orthogroups_2024-Update
Cre02.g077300 No alias fibrillarin 2 0.01 Orthogroups_2024-Update
HORVU6Hr1G091860.1 No alias methyltransferase component *(Nop1/fibrillarin) of... 0.04 Orthogroups_2024-Update
Kfl00029_0080 kfl00029_0080_v1.... (at4g25630 : 404.0) encodes a fibrillarin, a key... 0.03 Orthogroups_2024-Update
LOC_Os05g08360 No alias rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00017689-RA No alias (at4g25630 : 209.0) encodes a fibrillarin, a key... 0.02 Orthogroups_2024-Update
Potri.015G147500 No alias fibrillarin 1 0.03 Orthogroups_2024-Update
Pp1s177_5V6 No alias loc398434 protein 0.03 Orthogroups_2024-Update
Pp1s263_70V6 No alias loc398434 protein 0.02 Orthogroups_2024-Update
Sobic.004G349700.1 No alias methyltransferase component *(Nop1/fibrillarin) of... 0.05 Orthogroups_2024-Update
evm.model.contig_595.1 No alias (at5g52470 : 361.0) encodes a fibrillarin, a key... 0.05 Orthogroups_2024-Update
evm.model.tig00001049.16 No alias (at5g52470 : 336.0) encodes a fibrillarin, a key... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
BP GO:0006364 rRNA processing IEA 16Dec
MF GO:0008168 methyltransferase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000692 Fibrillarin 90 315
No external refs found!