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  5. HORVU7Hr1G112470.1

HORVU7Hr1G112470.1


Description : histone *(H2A)


Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G112470.1
Cluster HCAA Clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
A4A49_30810 No alias histone h2ax 0.04 Orthogroups_2024-Update
At5g02560 No alias Histone H2A [Source:UniProtKB/TrEMBL;Acc:F4KCF4] 0.04 Orthogroups_2024-Update
Cre06.g264950 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre06.g265350 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre06.g268300 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre06.g274200 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre12.g506250 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre13.g570100 No alias histone H2A 10 0.03 Orthogroups_2024-Update
Cre17.g709200 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Cre17.g711700 No alias histone H2A 10 0.02 Orthogroups_2024-Update
Glyma.03G241800 No alias gamma histone variant H2AX 0.02 Orthogroups_2024-Update
Glyma.12G215600 No alias histone H2A 2 0.02 Orthogroups_2024-Update
Glyma.13G334300 No alias histone H2A 12 0.02 Orthogroups_2024-Update
Glyma.19G234100 No alias histone H2A 7 0.03 Orthogroups_2024-Update
Glyma.19G239200 No alias gamma histone variant H2AX 0.03 Orthogroups_2024-Update
HORVU5Hr1G026650.2 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
HORVU6Hr1G009020.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
MA_191819g0010 No alias (at4g27230 : 166.0) Encodes HTA2, a histone H2A... 0.03 Orthogroups_2024-Update
MA_22203g0020 No alias (at5g54640 : 145.0) Isolated from T-DNA insertion line,... 0.04 Orthogroups_2024-Update
PSME_00008207-RA No alias (p02276|h2a2_wheat : 135.0) Histone H2A.2.1 - Triticum... 0.02 Orthogroups_2024-Update
PSME_00015855-RA No alias (at5g54640 : 145.0) Isolated from T-DNA insertion line,... 0.02 Orthogroups_2024-Update
Pp1s72_86V6 No alias histone h2a 0.04 Orthogroups_2024-Update
Sobic.001G416800.1 No alias histone *(H2A) 0.05 Orthogroups_2024-Update
Sobic.002G329900.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Sopen03g001250 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
evm.model.contig_498.5 No alias (p16866|h2a4_volca : 182.0) Histone H2A-IV - Volvox... 0.02 Orthogroups_2024-Update
evm.model.contig_533.4 No alias (p16866|h2a4_volca : 182.0) Histone H2A-IV - Volvox... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 56 141
IPR032454 Histone_H2A_C 144 177
No external refs found!