HORVU7Hr1G117230.1

Description : histone *(H2A)

Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU7Hr1G117230.1
Cluster	HCAA Clusters: Cluster_321

Target	Alias	Description	ECC score	Gene Family Method
HORVU4Hr1G070250.3	No alias	histone *(H2A)	0.04	Orthogroups_2024-Update
HORVU5Hr1G105090.1	No alias	histone *(H2A)	0.03	Orthogroups_2024-Update
LOC_Os12g25120	No alias	core histone H2A/H2B/H3/H4, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00008210-RA	No alias	(at1g54690 : 107.0) Encodes HTA3, a histone H2A protein....	0.02	Orthogroups_2024-Update
PSME_00017670-RA	No alias	(p35063\|h2ax_picab : 188.0) Histone H2AX - Picea abies...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	65	146
IPR032454	Histone_H2A_C	149	182

External Links

No external refs found!