1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU7Hr1G120930.1

HORVU7Hr1G120930.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G120930.1
Cluster HCAA Clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
A4A49_19370 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
A4A49_27114 No alias ring-h2 finger protein atl54 0.02 Orthogroups_2024-Update
A4A49_36993 No alias ring-h2 finger protein atl52 0.03 Orthogroups_2024-Update
A4A49_38307 No alias ring-h2 finger protein atl11 0.03 Orthogroups_2024-Update
At3g18930 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
Bradi5g09830 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00287.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E03386.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G00267.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I02588.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G090279 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G447566 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G264300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G108500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G028400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G069960.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G016710.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
HORVU7Hr1G036370.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU7Hr1G120910.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
LOC_Os09g36500 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g39640 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10436028g0020 No alias (at5g01880 : 117.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.002G006400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G235200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s102_105V6 No alias ring finger 0.02 Orthogroups_2024-Update
Seita.1G186400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.1G270700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.3G389400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.7G110600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.003G299800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G005000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.010G157500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc11g005300 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.04 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.04 Orthogroups_2024-Update
Sopen11g002340 No alias Ring finger domain 0.04 Orthogroups_2024-Update
evm.model.contig_2102.17 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 127 170
No external refs found!