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  5. At3g27650

At3g27650


Description : LOB domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q3]


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g27650
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
At2g40470 No alias LOB domain-containing protein 15... 0.05 Orthogroups_2024-Update
At5g15060 No alias LOB domain-containing protein 34... 0.03 Orthogroups_2024-Update
Bradi1g65760 No alias LOB domain-containing protein 1 0.02 Orthogroups_2024-Update
Brara.C02407.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.E00171.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F01152.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I00295.1 No alias AS2/LOB-type transcription factor 0.07 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G145568 No alias LOB domain-containing protein 11 0.07 Orthogroups_2024-Update
GRMZM2G447176 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.04G106400 No alias ASYMMETRIC LEAVES 2-like 1 0.03 Orthogroups_2024-Update
Glyma.05G040500 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.02 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Glyma.18G024400 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.19G004900 No alias LOB domain-containing protein 25 0.04 Orthogroups_2024-Update
LOC_Os01g07480 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g31080 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
MA_9839150g0010 No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.04 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00041736-RA No alias (at1g07900 : 133.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00048913-RA No alias (at2g28500 : 129.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.03 Orthogroups_2024-Update
PSME_00056199-RA No alias (at2g40470 : 114.0) LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
Potri.010G217700 No alias LOB domain-containing protein 1 0.03 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.05 Orthogroups_2024-Update
Pp1s9_303V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G025900.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc02g090410 No alias ASYMMETRIC LEAVES 2-like 1 (AHRD V3.3 *** A0A061DMY0_THECC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 39 135
No external refs found!