Sobic.001G009700.1

Description : histone *(H2A)

Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G009700.1
Cluster	HCAA Clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
Seita.2G287100.1	No alias	histone *(H2A)	0.03	Orthogroups_2024-Update
Seita.3G063000.1	No alias	histone *(H2A)	0.03	Orthogroups_2024-Update
Seita.5G370600.1	No alias	histone *(H2A)	0.03	Orthogroups_2024-Update
Seita.9G450000.1	No alias	histone *(H2A)	0.03	Orthogroups_2024-Update
Sobic.001G416900.1	No alias	histone *(H2A)	0.05	Orthogroups_2024-Update
Sobic.008G114500.1	No alias	histone *(H2A)	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006351	transcription, DNA-templated	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	105	138
IPR007125	Histone_H2A/H2B/H3	18	102

External Links

No external refs found!