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  5. Sobic.001G011200.1

Sobic.001G011200.1


Description : subunit beta of NAC ribosome-associated chaperone complex


Gene families : OG_42_0001746 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G011200.1
Cluster HCAA Clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
At1g17880 No alias Basic transcription factor 3... 0.04 Orthogroups_2024-Update
Bradi1g01600 No alias basic transcription factor 3 0.17 Orthogroups_2024-Update
Bradi3g29087 No alias basic transcription factor 3 0.04 Orthogroups_2024-Update
Brara.B02087.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.04 Orthogroups_2024-Update
Brara.G02326.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.08 Orthogroups_2024-Update
Brara.G03282.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.06 Orthogroups_2024-Update
Brara.H02448.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.13 Orthogroups_2024-Update
Brara.I04808.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.08 Orthogroups_2024-Update
GRMZM2G023242 No alias basic transcription factor 3 0.08 Orthogroups_2024-Update
GRMZM2G131577 No alias basic transcription factor 3 0.02 Orthogroups_2024-Update
Glyma.11G113901 No alias basic transcription factor 3 0.12 Orthogroups_2024-Update
Glyma.12G039900 No alias basic transcription factor 3 0.15 Orthogroups_2024-Update
HORVU1Hr1G042270.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.07 Orthogroups_2024-Update
HORVU5Hr1G122170.4 No alias subunit beta of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Kfl01239_0010 kfl01239_0010_v1.... (at1g73230 : 197.0) Nascent polypeptide-associated... 0.02 Orthogroups_2024-Update
LOC_Os03g63400 No alias transcription factor BTF3, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os10g34180 No alias transcription factor BTF3, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436879g0010 No alias (at1g17880 : 175.0) basic transcription factor 3 (BTF3);... 0.05 Orthogroups_2024-Update
MA_798143g0020 No alias (at1g73230 : 172.0) Nascent polypeptide-associated... 0.05 Orthogroups_2024-Update
PSME_00014555-RA No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
PSME_00031690-RA No alias (at1g73230 : 171.0) Nascent polypeptide-associated... 0.03 Orthogroups_2024-Update
Potri.012G037900 No alias basic transcription factor 3 0.06 Orthogroups_2024-Update
Potri.015G029800 No alias basic transcription factor 3 0.06 Orthogroups_2024-Update
Pp1s213_68V6 No alias transcription factor btf3 0.19 Orthogroups_2024-Update
Pp1s28_196V6 No alias No description available 0.05 Orthogroups_2024-Update
Pp1s479_10V6 No alias T18K17.10; nascent polypeptide-associated complex (NAC)... 0.08 Orthogroups_2024-Update
Seita.9G009500.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.09 Orthogroups_2024-Update
Sopen07g004640 No alias NAC domain 0.04 Orthogroups_2024-Update
Sopen09g005060 No alias NAC domain 0.04 Orthogroups_2024-Update
evm.model.contig_3542.8 No alias (at1g17880 : 98.2) basic transcription factor 3 (BTF3);... 0.2 Orthogroups_2024-Update
evm.model.tig00021181.13 No alias (at1g73230 : 162.0) Nascent polypeptide-associated... 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0035596 methylthiotransferase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002715 Nas_poly-pep-assoc_cplx_dom 36 91
No external refs found!