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  5. Sobic.001G020200.1

Sobic.001G020200.1


Description : C2H2-type subclass STOP transcription factor & C2H2 subclass WIP transcription factor


Gene families : OG_42_0001285 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G020200.1
Cluster HCAA Clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Brara.I02424.1 No alias C2H2-type subclass STOP transcription factor 0.03 Orthogroups_2024-Update
Sopen04g025220 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 155 177
No external refs found!