Sobic.001G027800.2

Description : endo-beta-1,4-mannanase

Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G027800.2
Cluster	HCAA Clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
403117	No alias	Glycosyl hydrolase superfamily protein	0.03	Orthogroups_2024-Update
At3g10890	No alias	Mannan endo-1,4-beta-mannosidase 3...	0.03	Orthogroups_2024-Update
MA_58990g0010	No alias	(at5g66460 : 446.0) Glycosyl hydrolase superfamily...	0.03	Orthogroups_2024-Update
PSME_00025496-RA	No alias	(at5g66460 : 454.0) Glycosyl hydrolase superfamily...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0071704	organic substance metabolic process	IEA	16Dec

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	Predicted GO
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	Predicted GO
BP	GO:0018193	peptidyl-amino acid modification	IEP	Predicted GO
BP	GO:0018205	peptidyl-lysine modification	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001547	Glyco_hydro_5	114	396

External Links

No external refs found!