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  5. Sobic.001G027900.1

Sobic.001G027900.1


Description : proton


Gene families : OG_42_0000316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000316_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G027900.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
A4A49_04888 No alias cationh(+) antiporter 18 0.03 Orthogroups_2024-Update
At2g13620 No alias Cation/H(+) antiporter 15... 0.03 Orthogroups_2024-Update
At4g23700 No alias Cation/H(+) antiporter 17... 0.04 Orthogroups_2024-Update
Glyma.01G223600 No alias cation/H+ exchanger 18 0.03 Orthogroups_2024-Update
Glyma.05G192400 No alias cation/hydrogen exchanger 15 0.03 Orthogroups_2024-Update
Glyma.06G154232 No alias cation/hydrogen exchanger 15 0.03 Orthogroups_2024-Update
Glyma.10G131500 No alias cation/hydrogen exchanger 15 0.03 Orthogroups_2024-Update
Glyma.19G230900 No alias cation/hydrogen exchanger 15 0.03 Orthogroups_2024-Update
Kfl00066_0220 kfl00066_0220_v1.1 (at5g41610 : 451.0) member of Putative Na+/H+ antiporter... 0.01 Orthogroups_2024-Update
MA_10432606g0010 No alias (at3g17630 : 714.0) member of Putative Na+/H+ antiporter... 0.03 Orthogroups_2024-Update
MA_10432859g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Mp4g10470.1 No alias proton:monovalent cation antiporter (CHX) 0.02 Orthogroups_2024-Update
PSME_00006009-RA No alias (at3g17630 : 266.0) member of Putative Na+/H+ antiporter... 0.02 Orthogroups_2024-Update
PSME_00009484-RA No alias (at3g17630 : 186.0) member of Putative Na+/H+ antiporter... 0.05 Orthogroups_2024-Update
PSME_00010865-RA No alias (at3g17630 : 393.0) member of Putative Na+/H+ antiporter... 0.03 Orthogroups_2024-Update
PSME_00019631-RA No alias (at3g17630 : 265.0) member of Putative Na+/H+ antiporter... 0.03 Orthogroups_2024-Update
PSME_00021003-RA No alias (at3g17630 : 369.0) member of Putative Na+/H+ antiporter... 0.06 Orthogroups_2024-Update
PSME_00030821-RA No alias (at3g17630 : 254.0) member of Putative Na+/H+ antiporter... 0.06 Orthogroups_2024-Update
PSME_00031606-RA No alias (at3g53720 : 323.0) member of Putative Na+/H+ antiporter... 0.03 Orthogroups_2024-Update
PSME_00033720-RA No alias (at3g17630 : 366.0) member of Putative Na+/H+ antiporter... 0.03 Orthogroups_2024-Update
PSME_00051305-RA No alias (at3g17630 : 202.0) member of Putative Na+/H+ antiporter... 0.02 Orthogroups_2024-Update
PSME_00052749-RA No alias (at3g17630 : 262.0) member of Putative Na+/H+ antiporter... 0.02 Orthogroups_2024-Update
PSME_00055958-RA No alias (at3g17630 : 261.0) member of Putative Na+/H+ antiporter... 0.05 Orthogroups_2024-Update
Potri.003G134900 No alias cation/H+ exchanger 18 0.03 Orthogroups_2024-Update
Potri.006G054700 No alias cation/H+ exchanger 20 0.03 Orthogroups_2024-Update
Potri.010G166900 No alias cation/H+ exchanger 20 0.03 Orthogroups_2024-Update
Pp1s123_30V6 No alias cation proton exchanger 0.03 Orthogroups_2024-Update
Pp1s270_2V6 No alias cation proton exchanger 0.02 Orthogroups_2024-Update
Seita.3G295000.1 No alias proton 0.04 Orthogroups_2024-Update
Seita.3G391600.1 No alias proton 0.05 Orthogroups_2024-Update
Seita.3G391700.1 No alias proton 0.03 Orthogroups_2024-Update
Seita.5G359700.1 No alias proton 0.04 Orthogroups_2024-Update
Solyc02g071070 No alias Cation/H(+) antiporter (AHRD V3.3 *** A0A0K9NMD6_ZOSMR) 0.03 Orthogroups_2024-Update
Solyc08g078880 No alias Cation/H(+) antiporter 15 (AHRD V3.3 *** W9QLT0_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA 16Dec
MF GO:0015299 solute:proton antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 43 426
No external refs found!