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  5. Sobic.001G028200.1

Sobic.001G028200.1


Description : RNA helicase *(Brr2)


Gene families : OG_42_0000868 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000868_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G028200.1
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Solyc06g071620 No alias U5 small nuclear ribonucleoprotein helicase (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
InterPro domains Description Start Stop
IPR004179 Sec63-dom 1875 2193
IPR004179 Sec63-dom 1046 1344
IPR001650 Helicase_C 778 922
IPR011545 DEAD/DEAH_box_helicase_dom 1393 1560
IPR011545 DEAD/DEAH_box_helicase_dom 549 723
No external refs found!