Sobic.001G034300.3


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G034300.3
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
A4A49_04752 No alias dof zinc finger protein dof3.5 0.01 Orthogroups_2024-Update
A4A49_23576 No alias dof zinc finger protein dof5.4 0.02 Orthogroups_2024-Update
A4A49_28483 No alias dof zinc finger protein dof5.7 0.06 Orthogroups_2024-Update
A4A49_34579 No alias dof zinc finger protein pbf 0.02 Orthogroups_2024-Update
At1g07640 No alias Dof-type zinc finger DNA-binding family protein... 0.01 Orthogroups_2024-Update
At1g29160 No alias Uncharacterized protein At1g29160 (Fragment)... 0.02 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.02 Orthogroups_2024-Update
At3g50410 No alias OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5] 0.02 Orthogroups_2024-Update
At3g55370 No alias OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4] 0.02 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.01 Orthogroups_2024-Update
Bradi1g03710 No alias OBF-binding protein 3 0.07 Orthogroups_2024-Update
Bradi1g15420 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.01 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.01 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.D01727.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Brara.E00119.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01530.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Brara.F02426.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
GRMZM2G142718 No alias Dof-type zinc finger DNA-binding family protein 0.01 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
GRMZM2G394941 No alias OBF binding protein 4 0.01 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.01 Orthogroups_2024-Update
Glyma.07G053900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.10G082000 No alias Dof-type zinc finger DNA-binding family protein 0.01 Orthogroups_2024-Update
Glyma.12G063800 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.13G062500 No alias cycling DOF factor 2 0.01 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.01 Orthogroups_2024-Update
Glyma.17G180600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
HORVU2Hr1G119110.4 No alias transcription factor *(DOF) 0.07 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.01 Orthogroups_2024-Update
LOC_Os01g48290 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os06g17410 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os10g35300 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_97259g0020 No alias (at5g62430 : 134.0) Dof-type zinc finger... 0.01 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.01 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.01 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.01 Orthogroups_2024-Update
Potri.004G046100 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Potri.006G084200 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.01 Orthogroups_2024-Update
Potri.009G029500 No alias OBF-binding protein 3 0.05 Orthogroups_2024-Update
Potri.011G055600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.012G018700 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.015G048300 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Pp1s267_24V6 No alias cycling dof factor 2 0.02 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.01 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.003G121400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.004G266200.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Solyc02g077950 No alias Dof zinc finger protein5 0.01 Orthogroups_2024-Update
Solyc02g078620 No alias Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA) 0.04 Orthogroups_2024-Update
Solyc03g115940 No alias Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA) 0.02 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.01 Orthogroups_2024-Update
Solyc06g076030 No alias Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU) 0.01 Orthogroups_2024-Update
Solyc08g082910 No alias Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA) 0.03 Orthogroups_2024-Update
Solyc09g010680 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen05g003730 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 125 179
No external refs found!