Sobic.001G042800.1


Description : Unknown function


Gene families : OG_42_0000470 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G042800.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_32405 No alias nudix hydrolase 18, mitochondrial 0.05 Orthogroups_2024-Update
At3g26690 No alias NUDX13 [Source:UniProtKB/TrEMBL;Acc:A0A178VBM7] 0.03 Orthogroups_2024-Update
Bradi1g44170 No alias nudix hydrolase homolog 21 0.03 Orthogroups_2024-Update
Bradi1g54020 No alias nudix hydrolase homolog 16 0.02 Orthogroups_2024-Update
Bradi3g56830 No alias nudix hydrolase homolog 21 0.03 Orthogroups_2024-Update
Cre02.g106500 No alias nudix hydrolase homolog 12 0.01 Orthogroups_2024-Update
GRMZM2G017532 No alias nudix hydrolase homolog 16 0.03 Orthogroups_2024-Update
HORVU6Hr1G073660.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp5g06600.1 No alias Nudix hydrolase 16, mitochondrial OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.003G161100 No alias nudix hydrolase homolog 12 0.02 Orthogroups_2024-Update
Potri.004G085600 No alias nudix hydrolase homolog 18 0.03 Orthogroups_2024-Update
Potri.017G131000 No alias nudix hydrolase homolog 17 0.03 Orthogroups_2024-Update
Seita.1G174600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G138200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g014500 No alias Nudix hydrolase-like protein (AHRD V3.3 *** G7J9C3_MEDTR) 0.03 Orthogroups_2024-Update
evm.model.tig00001249.11 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 48 156
No external refs found!