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  5. Sobic.001G050100.1

Sobic.001G050100.1


Description : Unknown function


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G050100.1
Cluster HCAA Clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
109968 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
228015 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
228582 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
229747 No alias germin-like protein 5 0.03 Orthogroups_2024-Update
270502 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
271728 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
428138 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
92738 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
A4A49_64273 No alias nectarin-1 0.02 Orthogroups_2024-Update
At3g04170 No alias Germin-like protein subfamily 1 member 3... 0.04 Orthogroups_2024-Update
At5g39160 No alias Germin-like protein subfamily 1 member 18... 0.03 Orthogroups_2024-Update
Bradi1g04907 No alias germin-like protein subfamily 2 member 2 precursor 0.04 Orthogroups_2024-Update
Bradi2g60860 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Orthogroups_2024-Update
Bradi3g15190 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g15210 No alias RmlC-like cupins superfamily protein 0.07 Orthogroups_2024-Update
Bradi3g15240 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g37680 No alias germin-like protein 1 0.03 Orthogroups_2024-Update
Brara.G01448.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G02258.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G090245 No alias germin-like protein 1 0.03 Orthogroups_2024-Update
Glyma.19G086100 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G086400 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G222800 No alias germin-like protein subfamily 2 member 2 precursor 0.03 Orthogroups_2024-Update
Glyma.20G220900 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G009450.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G011990.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G109190.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g32980 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g52720 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g13440 No alias cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp5g13870.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Orthogroups_2024-Update
PSME_00017404-RA No alias (at1g09560 : 254.0) germin-like protein (GLP5);... 0.04 Orthogroups_2024-Update
PSME_00026859-RA No alias (at1g09560 : 257.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
PSME_00042213-RA No alias (at1g09560 : 119.0) germin-like protein (GLP5);... 0.02 Orthogroups_2024-Update
PSME_00044974-RA No alias (at5g39160 : 122.0) RmlC-like cupins superfamily... 0.02 Orthogroups_2024-Update
Potri.004G179800 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G140400 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G051600 No alias RmlC-like cupins superfamily protein 0.06 Orthogroups_2024-Update
Potri.013G064000 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G180600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G131200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G066500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g088280 No alias Germin family protein (AHRD V3.3 *** G7I5N4_MEDTR) 0.03 Orthogroups_2024-Update
Solyc01g088300 No alias Germin-like protein 1 (AHRD V3.3 *** B9NCV4_POPTR) 0.04 Orthogroups_2024-Update
Solyc03g113580 No alias Germin-like protein (AHRD V3.3 *** Q8H2A6_ANACO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 81 223
No external refs found!