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  5. Sobic.001G056300.1

Sobic.001G056300.1


Description : bHLH-type transcription factor


Gene families : OG_42_0000630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G056300.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Bradi1g47350 No alias LJRHL1-like 1 0.04 Orthogroups_2024-Update
GRMZM2G024530 No alias LJRHL1-like 3 0.04 Orthogroups_2024-Update
PSME_00025212-RA No alias (at4g30980 : 108.0) Encodes a basic helix-loop-helix... 0.03 Orthogroups_2024-Update
Potri.006G186600 No alias LJRHL1-like 1 0.03 Orthogroups_2024-Update
Potri.018G109500 No alias LJRHL1-like 1 0.04 Orthogroups_2024-Update
Seita.6G063700.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G065500.1 No alias bHLH-type transcription factor 0.06 Orthogroups_2024-Update
Solyc12g010170 No alias bHLH transcription factor 070 0.03 Orthogroups_2024-Update
Sopen12g005040 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 134 178
No external refs found!