1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G060500.1

Sobic.001G060500.1


Description : methylation reader *(ECT)


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G060500.1
Cluster HCAA Clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
At1g55500 No alias evolutionarily conserved C-terminal region 4... 0.03 Orthogroups_2024-Update
At3g03950 No alias AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94] 0.03 Orthogroups_2024-Update
Brara.A03258.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
Brara.B01161.1 No alias methylation reader *(ECT) 0.02 Orthogroups_2024-Update
Brara.B02570.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
LOC_Os05g01520 No alias ECT protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00014883-RA No alias (at3g13460 : 331.0) Physically interacts with CIPK1.;... 0.03 Orthogroups_2024-Update
Potri.004G223800 No alias evolutionarily conserved C-terminal region 11 0.04 Orthogroups_2024-Update
Potri.019G034300 No alias evolutionarily conserved C-terminal region 2 0.03 Orthogroups_2024-Update
Seita.9G059600.1 No alias methylation reader *(ECT) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006480 N-terminal protein amino acid methylation IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031365 N-terminal protein amino acid modification IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 377 515
No external refs found!