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  5. Sobic.001G075800.1

Sobic.001G075800.1


Description : Unknown function


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G075800.1
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
A4A49_41641 No alias heterogeneous nuclear ribonucleoprotein 1 0.04 Orthogroups_2024-Update
At2g33410 No alias Putative RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:O22791] 0.02 Orthogroups_2024-Update
Bradi1g37692 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Orthogroups_2024-Update
Brara.C01292.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01670.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G014400 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
PSME_00013044-RA No alias (at3g13224 : 257.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
PSME_00039552-RA No alias (at3g07810 : 282.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 70
IPR000504 RRM_dom 111 168
No external refs found!