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  5. Sobic.001G080000.2

Sobic.001G080000.2


Description : component *(ADA1) of SAGA transcription co-activator complex


Gene families : OG_42_0000854 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000854_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G080000.2
Cluster HCAA Clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
A4A49_36625 No alias hypothetical protein 0.03 Orthogroups_2024-Update
GRMZM2G035153 No alias Function unknown 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 7 238
No external refs found!