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  5. Sobic.001G086000.1

Sobic.001G086000.1


Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G086000.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g45700 No alias COBRA, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051382 kinetochore assembly IEP Predicted GO
BP GO:0051383 kinetochore organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 55 218
No external refs found!