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  5. Sobic.001G087700.1

Sobic.001G087700.1


Description : oligopeptide transporter *(OPT)


Gene families : OG_42_0000467 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G087700.1
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
A4A49_29570 No alias oligopeptide transporter 7 0.03 Orthogroups_2024-Update
Bradi3g20710 No alias oligopeptide transporter 5 0.03 Orthogroups_2024-Update
GRMZM2G141975 No alias oligopeptide transporter 4 0.03 Orthogroups_2024-Update
Glyma.20G067300 No alias oligopeptide transporter 7 0.03 Orthogroups_2024-Update
HORVU1Hr1G084090.1 No alias oligopeptide transporter *(OPT) 0.03 Orthogroups_2024-Update
Kfl00583_0020 kfl00583_0020_v1.1 (at5g64410 : 861.0) oligopeptide transporter;... 0.02 Orthogroups_2024-Update
LOC_Os06g03540 No alias oligopeptide transporter, putative, expressed 0.02 Orthogroups_2024-Update
MA_541g0010 No alias (at4g16370 : 1066.0) Encodes an oligopeptide transporter... 0.03 Orthogroups_2024-Update
Potri.002G109300 No alias oligopeptide transporter 2 0.03 Orthogroups_2024-Update
Pp1s91_181V6 No alias oligopeptide transporter opt family 0.03 Orthogroups_2024-Update
Seita.6G193400.1 No alias oligopeptide transporter *(OPT) 0.03 Orthogroups_2024-Update
Sobic.010G015500.1 No alias oligopeptide transporter *(OPT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 45 710
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