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  5. Sobic.001G088100.2

Sobic.001G088100.2


Description : component *(ADA2) of SAGA transcription co-activator complex


Gene families : OG_42_0003839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G088100.2
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Seita.9G090600.1 No alias component *(ADA2) of SAGA transcription co-activator complex 0.03 Orthogroups_2024-Update
evm.model.tig00000042.4 No alias (at4g16420 : 167.0) Transcriptional co-activator.... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 111 152
IPR000433 Znf_ZZ 50 91
No external refs found!