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Description : assembly factor NDF5 involved in NDH complex assembly
Gene families : OG_42_0004373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004373_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.001G090200.1 | |
| Cluster | HCAA Clusters: Cluster_129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os03g06230 | No alias | galactose mutarotase-like, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.019G034100 | No alias | NDH-dependent cyclic electron flow 1 | 0.03 | Orthogroups_2024-Update | |
| Seita.9G092700.1 | No alias | assembly factor NDF5 involved in NDH complex assembly | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| CC | GO:0000786 | nucleosome | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Predicted GO |
| MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
| MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
| MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Predicted GO |
| MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
| MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Predicted GO |
| MF | GO:0004556 | alpha-amylase activity | IEP | Predicted GO |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
| MF | GO:0004834 | tryptophan synthase activity | IEP | Predicted GO |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
| MF | GO:0016874 | ligase activity | IEP | Predicted GO |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
| CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
| MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
| BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
| CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |