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  5. Sobic.001G090500.1

Sobic.001G090500.1


Description : methylation reader *(ECT)


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G090500.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Brara.G02088.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
LOC_Os03g06240 No alias YT521-B-like family domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g04000 No alias ECT protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g01520 No alias ECT protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00014883-RA No alias (at3g13460 : 331.0) Physically interacts with CIPK1.;... 0.04 Orthogroups_2024-Update
Potri.004G223800 No alias evolutionarily conserved C-terminal region 11 0.03 Orthogroups_2024-Update
Pp1s181_63V6 No alias contains ESTs C72821(E2325),AU085902(E2325) similar to... 0.03 Orthogroups_2024-Update
Sopen01g045890 No alias YT521-B-like domain 0.04 Orthogroups_2024-Update
Sopen05g024050 No alias YT521-B-like domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 436 574
No external refs found!