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  5. Sobic.001G091600.1

Sobic.001G091600.1


Description : Unknown function


Gene families : OG_42_0000341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G091600.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Bradi2g19470 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
Brara.A02033.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.20G147100 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
MA_23866g0010 No alias (at1g79770 : 105.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
MA_6921525g0010 No alias (at1g79770 : 132.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
MA_9276027g0010 No alias (at1g79770 : 137.0) Protein of unknown function... 0.05 Orthogroups_2024-Update
Pp1s2_210V6 No alias F19K16.25; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 3 96
No external refs found!