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Description : component *(eS27) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0001909 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001909_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.001G091801.1 | |
| Cluster | HCAA Clusters: Cluster_124 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 163947 | No alias | ribosomal protein S27 | 0.08 | Orthogroups_2024-Update | |
| A4A49_15619 | No alias | 40s ribosomal protein s27-2 | 0.17 | Orthogroups_2024-Update | |
| At2g45710 | No alias | 40S ribosomal protein S27-1... | 0.07 | Orthogroups_2024-Update | |
| At5g47930 | No alias | 40S ribosomal protein S27-3... | 0.03 | Orthogroups_2024-Update | |
| Bradi3g43475 | No alias | ribosomal protein S27 | 0.15 | Orthogroups_2024-Update | |
| Bradi5g08453 | No alias | ribosomal protein S27 | 0.21 | Orthogroups_2024-Update | |
| Brara.B03416.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.29 | Orthogroups_2024-Update | |
| Brara.F03041.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.19 | Orthogroups_2024-Update | |
| Brara.G01908.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.22 | Orthogroups_2024-Update | |
| Brara.I00365.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
| Brara.I04203.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.33 | Orthogroups_2024-Update | |
| Cre12.g529400 | No alias | ribosomal protein S27 | 0.33 | Orthogroups_2024-Update | |
| GRMZM2G066222 | No alias | ribosomal protein S27 | 0.06 | Orthogroups_2024-Update | |
| Glyma.16G046500 | No alias | ribosomal protein S27 | 0.11 | Orthogroups_2024-Update | |
| Glyma.19G105700 | No alias | ribosomal protein S27 | 0.1 | Orthogroups_2024-Update | |
| HORVU4Hr1G014130.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
| HORVU4Hr1G074270.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
| HORVU7Hr1G112740.4 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
| LOC_Os02g27769 | No alias | 40S ribosomal protein S27, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g27860 | No alias | 40S ribosomal protein S27, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| LOC_Os04g32710 | No alias | 40S ribosomal protein S27, putative, expressed | 0.07 | Orthogroups_2024-Update | |
| MA_87055g0010 | No alias | (at3g61110 : 146.0) Arabidopsis ribosomal protein;... | 0.07 | Orthogroups_2024-Update | |
| Mp5g09510.1 | No alias | component RPS27 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
| PSME_00029823-RA | No alias | (at3g61110 : 146.0) Arabidopsis ribosomal protein;... | 0.09 | Orthogroups_2024-Update | |
| Potri.003G161200 | No alias | ribosomal protein S27 | 0.17 | Orthogroups_2024-Update | |
| Potri.006G192900 | No alias | ribosomal protein S27 | 0.04 | Orthogroups_2024-Update | |
| Pp1s165_39V6 | No alias | 40s ribosomal protein | 0.36 | Orthogroups_2024-Update | |
| Pp1s179_13V6 | No alias | 40s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s17_304V6 | No alias | 40s ribosomal protein | 0.09 | Orthogroups_2024-Update | |
| Pp1s63_161V6 | No alias | 40s ribosomal protein | 0.26 | Orthogroups_2024-Update | |
| Seita.1G160500.1 | No alias | component *(eS27) of small ribosomal-subunit (SSU) proteome | 0.27 | Orthogroups_2024-Update | |
| Solyc01g008090 | No alias | 40S ribosomal protein S27 (AHRD V3.3 *-* M0TJU4_MUSAM) | 0.38 | Orthogroups_2024-Update | |
| Solyc06g068710 | No alias | 40S ribosomal protein S27 (AHRD V3.3 *** K4C845_SOLLC) | 0.02 | Orthogroups_2024-Update | |
| Sopen01g003640 | No alias | Ribosomal protein S27 | 0.36 | Orthogroups_2024-Update | |
| evm.model.tig00001299.2 | No alias | (at5g47930 : 145.0) Zinc-binding ribosomal protein... | 0.16 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
| CC | GO:0005840 | ribosome | IEA | 16Dec |
| BP | GO:0006412 | translation | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
| CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000592 | Ribosomal_S27e | 30 | 84 |
| No external refs found! |