Sobic.001G093200.2

Description : HSF-type transcription factor

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G093200.2
Cluster	HCAA Clusters: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
At1g32330	No alias	Heat stress transcription factor A-1d...	0.03	Orthogroups_2024-Update
At2g26150	No alias	Heat stress transcription factor A-2...	0.04	Orthogroups_2024-Update
GRMZM2G118047	No alias	heat shock transcription factor C1	0.04	Orthogroups_2024-Update
GRMZM2G301485	No alias	heat shock transcription factor B2A	0.02	Orthogroups_2024-Update
Glyma.01G217400	No alias	winged-helix DNA-binding transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.03G157300	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.04G052000	No alias	heat shock transcription factor A2	0.03	Orthogroups_2024-Update
Glyma.10G029600	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.11G025700	No alias	winged-helix DNA-binding transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.17G174900	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
HORVU1Hr1G083420.11	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G071550.3	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G105770.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
PSME_00034387-RA	No alias	(at1g46264 : 176.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
PSME_00055440-RA	No alias	(at3g22830 : 268.0) member of Heat Stress Transcription...	0.04	Orthogroups_2024-Update
Potri.002G124800	No alias	heat shock transcription factor B4	0.04	Orthogroups_2024-Update
Potri.006G226800	No alias	heat shock transcription factor A2	0.03	Orthogroups_2024-Update
Solyc08g080540	No alias	SolycHsfB2b	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008237	metallopeptidase activity	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	59	148

External Links

No external refs found!

Sobic.001G093200.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation