Sobic.001G095500.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000493 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G095500.1
Cluster	HCAA Clusters: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
A4A49_42721	No alias	putative wrky transcription factor 7	0.05	Orthogroups_2024-Update
Bradi3g18580	No alias	WRKY DNA-binding protein 11	0.03	Orthogroups_2024-Update
GRMZM2G070211	No alias	WRKY DNA-binding protein 21	0.02	Orthogroups_2024-Update
GRMZM2G102583	No alias	WRKY DNA-binding protein 11	0.03	Orthogroups_2024-Update
GRMZM2G130374	No alias	WRKY DNA-binding protein 21	0.02	Orthogroups_2024-Update
Glyma.04G076200	No alias	WRKY DNA-binding protein 11	0.03	Orthogroups_2024-Update
MA_10436931g0040	No alias	(at4g31550 : 150.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
MA_31009g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
Mp3g00010.1	No alias	transcription factor (WRKY)	0.02	Orthogroups_2024-Update
PSME_00021940-RA	No alias	(at2g30590 : 184.0) Encodes WRKY DNA-binding protein 21...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
BP	GO:0046034	ATP metabolic process	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR018872	Zn-cluster-dom	294	338
IPR003657	WRKY_dom	342	398

External Links

No external refs found!

Sobic.001G095500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation