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  5. At3g28560

At3g28560


Description : BCS1 AAA-type ATPase [Source:UniProtKB/TrEMBL;Acc:Q9LJJ9]


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g28560
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
At5g17730 No alias AAA-ATPase At5g17730 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN78] 0.03 Orthogroups_2024-Update
Bradi2g14590 No alias cytochrome BC1 synthesis 0.03 Orthogroups_2024-Update
GRMZM2G095254 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
GRMZM2G175593 No alias cytochrome BC1 synthesis 0.02 Orthogroups_2024-Update
Glyma.02G053600 No alias cytochrome BC1 synthesis 0.03 Orthogroups_2024-Update
LOC_Os10g22700 No alias AAA-type ATPase family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g28460 No alias ATPase, AAA family domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s325_27V6 No alias atp binding 0.02 Orthogroups_2024-Update
Pp1s59_355V6 No alias atp binding 0.03 Orthogroups_2024-Update
Sobic.002G219500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc10g079630 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 30 115
No external refs found!