1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G098200.1

Sobic.001G098200.1


Description : Unknown function


Gene families : OG_42_0004428 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004428_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G098200.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Brara.I01174.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp5g24050.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010036 MDP_1_eu_arc 20 40
IPR010036 MDP_1_eu_arc 47 162
No external refs found!