Sobic.001G112900.1


Description : Unknown function


Gene families : OG_42_0002620 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002620_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G112900.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
82738 No alias Protein of unknown function (DUF760) 0.03 Orthogroups_2024-Update
At3g17800 No alias Protein of unknown function (DUF760) [Source:TAIR;Acc:AT3G17800] 0.03 Orthogroups_2024-Update
Bradi1g10640 No alias Protein of unknown function (DUF760) 0.03 Orthogroups_2024-Update
Brara.C03661.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C03664.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02411.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G152548 No alias Protein of unknown function (DUF760) 0.05 Orthogroups_2024-Update
HORVU4Hr1G008300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Kfl00092_0050 kfl00092_0050_v1.1 (at1g48450 : 245.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
MA_10435028g0010 No alias (at3g17800 : 370.0) mRNA level of the MEB5.2 gene... 0.04 Orthogroups_2024-Update
PSME_00038226-RA No alias (at3g17800 : 176.0) mRNA level of the MEB5.2 gene... 0.02 Orthogroups_2024-Update
PSME_00043850-RA No alias (at1g48450 : 222.0) Protein of unknown function... 0.01 Orthogroups_2024-Update
Seita.9G115500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008479 DUF760 140 265
No external refs found!