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  5. Sobic.001G130700.1

Sobic.001G130700.1


Description : Unknown function


Gene families : OG_42_0000906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G130700.1
Cluster HCAA Clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
A4A49_37750 No alias protein upstream of flc 0.02 Orthogroups_2024-Update
At3g46110 No alias At3g46110 [Source:UniProtKB/TrEMBL;Acc:Q8GY65] 0.03 Orthogroups_2024-Update
Glyma.05G180800 No alias Domain of unknown function (DUF966) 0.03 Orthogroups_2024-Update
Glyma.08G138500 No alias Domain of unknown function (DUF966) 0.06 Orthogroups_2024-Update
Glyma.11G193000 No alias Domain of unknown function (DUF966) 0.04 Orthogroups_2024-Update
Glyma.13G322200 No alias Domain of unknown function (DUF966) 0.03 Orthogroups_2024-Update
LOC_Os01g62200 No alias domain of unknown function DUF966 domain containing... 0.02 Orthogroups_2024-Update
LOC_Os09g39750 No alias domain of unknown function DUF966 domain containing... 0.03 Orthogroups_2024-Update
Pp1s244_1V6 No alias MTH12.21; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.5G375200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen04g024600 No alias Domain of unknown function (DUF966) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR010369 DUF966 22 431
No external refs found!