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  5. Sobic.001G141600.1

Sobic.001G141600.1


Description : E3 ubiquitin ligase *(BRG)


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G141600.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
A4A49_31391 No alias e3 ubiquitin-protein ligase boi 0.02 Orthogroups_2024-Update
Brara.A03303.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
Brara.C03441.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
GRMZM2G057262 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Glyma.17G241100 No alias S-ribonuclease binding protein 1 0.02 Orthogroups_2024-Update
LOC_Os03g03490 No alias expressed protein 0.04 Orthogroups_2024-Update
Solyc02g031710 No alias SBP (S-ribonuclease binding protein) family protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!