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  5. Sobic.001G142800.2

Sobic.001G142800.2


Description : metal cation transporter *(ZIP) & iron/zinc/manganese/cobalt cation transporter *(IRT)


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G142800.2
Cluster HCAA Clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
91749 No alias zinc transporter 4 precursor 0.03 Orthogroups_2024-Update
Cre01.g000150 No alias zinc transporter 7 precursor 0.02 Orthogroups_2024-Update
Cre07.g355150 No alias zinc transporter 5 precursor 0.01 Orthogroups_2024-Update
Glyma.07G223200 No alias zinc transporter 10 precursor 0.04 Orthogroups_2024-Update
LOC_Os03g46454 No alias metal cation transporter, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g12890 No alias metal cation transporter, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g19340.1 No alias metal cation transporter (ZIP) 0.02 Orthogroups_2024-Update
PSME_00015189-RA No alias (at1g10970 : 316.0) A member of Zrt- and Irt-related... 0.03 Orthogroups_2024-Update
Potri.001G279300 No alias ZIP metal ion transporter family 0.02 Orthogroups_2024-Update
Seita.3G208100.1 No alias metal cation transporter *(ZIP) 0.03 Orthogroups_2024-Update
Sopen05g031880 No alias ZIP Zinc transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0030001 metal ion transport IEA 16Dec
MF GO:0046873 metal ion transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 67 389
No external refs found!