Sobic.001G143300.1


Description : F-class RAB GTPase & vesicle tethering small GTPase *(RAB5)


Gene families : OG_42_0002001 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G143300.1
Cluster HCAA Clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
At4g19640 No alias RABF2B [Source:UniProtKB/TrEMBL;Acc:A0A178UXV7] 0.03 Orthogroups_2024-Update
LOC_Os12g43550 No alias ras-related protein, putative, expressed 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 173
No external refs found!