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  5. Sobic.001G155300.1

Sobic.001G155300.1


Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & neoxanthin cleavage protein


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G155300.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_16982 No alias 9-cis-epoxycarotenoid dioxygenase nced1, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_24598 No alias 9-cis-epoxycarotenoid dioxygenase nced3, chloroplastic 0.03 Orthogroups_2024-Update
Brara.A00958.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.A01020.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.03 Orthogroups_2024-Update
Brara.A03189.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Brara.E02677.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.H01021.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.03 Orthogroups_2024-Update
Brara.I04483.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.04 Orthogroups_2024-Update
Glyma.08G096200 No alias nine-cis-epoxycarotenoid dioxygenase 5 0.02 Orthogroups_2024-Update
Glyma.15G250100 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.02 Orthogroups_2024-Update
HORVU5Hr1G008050.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
HORVU5Hr1G054970.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
LOC_Os02g47510 No alias 9-cis-epoxycarotenoid dioxygenase 1, chloroplast... 0.03 Orthogroups_2024-Update
LOC_Os12g42280 No alias 9-cis-epoxycarotenoid dioxygenase 1, chloroplast... 0.02 Orthogroups_2024-Update
PSME_00053495-RA No alias (at3g14440 : 677.0) Encodes ... 0.03 Orthogroups_2024-Update
PSME_00056181-RA No alias (at3g14440 : 662.0) Encodes ... 0.02 Orthogroups_2024-Update
PSME_00056713-RA No alias (at4g19170 : 585.0) chloroplast-targeted member of a... 0.04 Orthogroups_2024-Update
Potri.011G112400 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.04 Orthogroups_2024-Update
Seita.3G391000.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Solyc07g056570 No alias notabilis 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 136 602
No external refs found!