Sobic.001G156800.2

Description : metal cation transporter *(ZIP) & iron/zinc/manganese/cobalt cation transporter *(IRT)

Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G156800.2
Cluster	HCAA Clusters: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g21580	No alias	zinc transporter 1 precursor	0.03	Orthogroups_2024-Update
Brara.A01066.1	No alias	iron/zinc/manganese/cobalt cation transporter *(IRT) &...	0.02	Orthogroups_2024-Update
Brara.I01522.1	No alias	metal cation transporter *(ZIP)	0.03	Orthogroups_2024-Update
GRMZM2G064382	No alias	zinc transporter 4 precursor	0.03	Orthogroups_2024-Update
Glyma.11G169300	No alias	ZIP metal ion transporter family	0.04	Orthogroups_2024-Update
Glyma.18G060300	No alias	ZIP metal ion transporter family	0.04	Orthogroups_2024-Update
MA_189319g0010	No alias	(at1g05300 : 299.0) member of Fe(II) transporter isolog...	0.02	Orthogroups_2024-Update
Seita.3G208000.1	No alias	metal cation transporter *(ZIP)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IEA	16Dec
MF	GO:0046873	metal ion transmembrane transporter activity	IEA	16Dec
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

Type	GO Term	Name	Evidence	Source
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
BP	GO:0048364	root development	IEP	Predicted GO
BP	GO:0048367	shoot system development	IEP	Predicted GO
BP	GO:0048731	system development	IEP	Predicted GO
BP	GO:0099402	plant organ development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003689	ZIP	60	375

External Links

No external refs found!