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  5. Sobic.001G158500.1

Sobic.001G158500.1


Description : regulatory protein *(LSD/LOL) of programmed cell death


Gene families : OG_42_0001639 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G158500.1
Cluster HCAA Clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
PSME_00045872-RA No alias (at1g32540 : 145.0) Encodes a protein with 3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 46 70
IPR005735 Znf_LSD1 7 31
IPR005735 Znf_LSD1 84 108
No external refs found!