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  5. Sobic.001G160500.1

Sobic.001G160500.1


Description : phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G160500.1
Cluster HCAA Clusters: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
Brara.B00136.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E00793.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
GRMZM2G029048 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G089440.4 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
HORVU2Hr1G089540.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
HORVU6Hr1G058840.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Mp1g10150.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Orthogroups_2024-Update
PSME_00022344-RA No alias (p45733|pal3_tobac : 833.0) Phenylalanine ammonia-lyase... 0.04 Orthogroups_2024-Update
Potri.006G126800 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Potri.010G224200 No alias PHE ammonia lyase 1 0.04 Orthogroups_2024-Update
Potri.016G091100 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Seita.1G240200.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Solyc09g007900 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL5_SOLLC) 0.03 Orthogroups_2024-Update
Solyc09g007910 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL5_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 63 543
No external refs found!