Sobic.001G166100.4

Description : Unknown function

Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G166100.4
Cluster	HCAA Clusters: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os03g42290	No alias	B3 DNA binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
Potri.002G129900	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	1077	1140
IPR003340	B3_DNA-bd	34	122
IPR003340	B3_DNA-bd	861	946
IPR003340	B3_DNA-bd	642	734
IPR003340	B3_DNA-bd	256	336
IPR003340	B3_DNA-bd	430	523

External Links

No external refs found!