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  5. Sobic.001G168800.2

Sobic.001G168800.2


Description : substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G168800.2
Cluster HCAA Clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
74933 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
A4A49_18800 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
At2g30520 No alias Root phototropism protein 2... 0.04 Orthogroups_2024-Update
At3g08570 No alias BTB/POZ domain-containing protein At3g08570... 0.04 Orthogroups_2024-Update
At5g67440 No alias BTB/POZ domain-containing protein NPY3... 0.03 Orthogroups_2024-Update
Brara.E01281.1 No alias phototropin signalling factor *(RPT2) 0.03 Orthogroups_2024-Update
Brara.I02813.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J00152.1 No alias substrate adaptor *(SETH6) of CUL3-BTB E3 ubiquitin... 0.04 Orthogroups_2024-Update
Glyma.05G104000 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.17G223000 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G073650.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 Orthogroups_2024-Update
LOC_Os11g02610 No alias BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.04 Orthogroups_2024-Update
LOC_Os11g02620 No alias BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
Mp5g03480.1 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Orthogroups_2024-Update
PSME_00001436-RA No alias (at1g03010 : 601.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
PSME_00019671-RA No alias (at5g64330 : 730.0) Involved in blue light response... 0.03 Orthogroups_2024-Update
PSME_00021708-RA No alias (at5g66560 : 98.6) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
PSME_00049027-RA No alias (at1g67900 : 575.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Potri.005G130700 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.005G146400 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Potri.007G033900 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Potri.017G048200 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Pp1s112_43V6 No alias protein binding 0.02 Orthogroups_2024-Update
Pp1s93_32V6 No alias root phototropism 0.02 Orthogroups_2024-Update
Seita.1G203400.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Seita.7G018400.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Seita.7G137100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G169800.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G026800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G066100.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Solyc01g107180 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g066730 No alias phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Sopen01g049440 No alias NPH3 family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 28 116
IPR027356 NPH3_dom 211 466
No external refs found!