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  5. Sobic.001G169200.1

Sobic.001G169200.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G169200.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
At3g49940 No alias LOB domain-containing protein 38... 0.04 Orthogroups_2024-Update
At4g37540 No alias LOB domain-containing protein 39... 0.05 Orthogroups_2024-Update
At5g67420 No alias LOB domain-containing protein 37... 0.03 Orthogroups_2024-Update
Brara.B03977.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C04300.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I00847.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G192600 No alias LOB domain-containing protein 38 0.02 Orthogroups_2024-Update
Glyma.05G103300 No alias LOB domain-containing protein 39 0.02 Orthogroups_2024-Update
HORVU4Hr1G013380.2 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
MA_122595g0010 No alias (at3g49940 : 211.0) LOB domain-containing protein 38... 0.04 Orthogroups_2024-Update
PSME_00021974-RA No alias (at1g67100 : 182.0) LOB domain-containing protein 40... 0.02 Orthogroups_2024-Update
PSME_00026677-RA No alias (at1g67100 : 203.0) LOB domain-containing protein 40... 0.03 Orthogroups_2024-Update
PSME_00031117-RA No alias (at1g67100 : 181.0) LOB domain-containing protein 40... 0.03 Orthogroups_2024-Update
PSME_00041119-RA No alias (at5g67420 : 212.0) LOB domain-containing protein 37... 0.03 Orthogroups_2024-Update
PSME_00043038-RA No alias (at1g67100 : 208.0) LOB domain-containing protein 40... 0.03 Orthogroups_2024-Update
Potri.007G053600 No alias LOB domain-containing protein 38 0.02 Orthogroups_2024-Update
Seita.9G170000.1 No alias AS2/LOB-type transcription factor 0.08 Orthogroups_2024-Update
Solyc02g092550 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g049450 No alias Protein of unknown function DUF260 0.04 Orthogroups_2024-Update
Sopen02g037120 No alias Protein of unknown function DUF260 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 2 100
No external refs found!