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  5. Sobic.001G173000.1

Sobic.001G173000.1


Description : EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G173000.1
Cluster HCAA Clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
A4A49_08386 No alias 5-epi-aristolochene synthase 3 0.03 Orthogroups_2024-Update
A4A49_60718 No alias 5-epi-aristolochene synthase 0.03 Orthogroups_2024-Update
Potri.001G415100 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Potri.015G085500 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Seita.6G048400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Sobic.007G055600.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Solyc01g101190 No alias Alpha-humulene/(-)-(E)-beta-caryophyllene synthase (AHRD... 0.03 Orthogroups_2024-Update
Sopen06g020150 No alias Terpene synthase family, metal binding domain 0.02 Orthogroups_2024-Update
Sopen07g025780 No alias Terpene synthase family, metal binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0010333 terpene synthase activity IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 224 488
IPR001906 Terpene_synth_N 19 193
No external refs found!