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  5. Sobic.001G179400.1

Sobic.001G179400.1


Description : EC_2.4 glycosyltransferase


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G179400.1
Cluster HCAA Clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
At5g57530 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
Brara.A00716.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Brara.F02444.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
GRMZM2G004699 No alias xyloglucan endotransglucosylase/hydrolase 5 0.02 Orthogroups_2024-Update
GRMZM2G112619 No alias xyloglucan endotransglucosylase/hydrolase 26 0.02 Orthogroups_2024-Update
GRMZM2G128876 No alias xyloglucan endotransglucosylase/hydrolase 25 0.04 Orthogroups_2024-Update
Glyma.13G322500 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Glyma.15G169100 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Glyma.17G065000 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Glyma.17G065200 No alias xyloglucan endotransglycosylase 6 0.02 Orthogroups_2024-Update
Glyma.18G106500 No alias xyloglucan endotransglucosylase/hydrolase 15 0.03 Orthogroups_2024-Update
HORVU0Hr1G022110.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
HORVU7Hr1G098440.2 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
MA_10428415g0010 No alias (at5g13870 : 307.0) EXGT-A4, endoxyloglucan... 0.02 Orthogroups_2024-Update
MA_20669g0010 No alias (at2g36870 : 290.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_848882g0010 No alias (at5g65730 : 338.0) xyloglucan... 0.03 Orthogroups_2024-Update
Mp2g18360.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
Potri.018G095200 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Pp1s309_38V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Pp1s309_41V6 No alias xyloglucan endotransglucosylase hydrolase protein a 0.02 Orthogroups_2024-Update
Seita.4G162400.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc11g065600 No alias xyloglucan endotransglucosylase-hydrolase 4 0.03 Orthogroups_2024-Update
Sopen01g043150 No alias Xyloglucan endo-transglycosylase (XET) C-terminus 0.02 Orthogroups_2024-Update
Sopen07g026530 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
CC GO:0005618 cell wall IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
BP GO:0006073 cellular glucan metabolic process IEA 16Dec
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA 16Dec
CC GO:0048046 apoplast IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000757 GH16 39 231
IPR010713 XET_C 273 319
No external refs found!