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  5. Sobic.001G187000.2

Sobic.001G187000.2


Description : Unknown function


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G187000.2
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.03 Orthogroups_2024-Update
A4A49_31911 No alias 4-coumarate--coa ligase-like 6 0.03 Orthogroups_2024-Update
Brara.E02091.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Brara.F01460.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Glyma.01G232400 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
HORVU7Hr1G111130.3 No alias p-coumarate 0.02 Orthogroups_2024-Update
PSME_00015569-RA No alias (o24146|4cl2_tobac : 689.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
Potri.001G055700 No alias acyl-CoA synthetase 5 0.03 Orthogroups_2024-Update
Seita.7G048000.1 No alias acyl-CoA synthetase *(ACS5) 0.02 Orthogroups_2024-Update
Solyc03g097030 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 467 542
IPR000873 AMP-dep_Synth/Lig 40 458
No external refs found!