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Description : Unknown function
Gene families : OG_42_0003964 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003964_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.001G191200.1 | |
| Cluster | HCAA Clusters: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 74651 | No alias | dormancy-associated protein-like 1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_27957 | No alias | dormancy-associated protein-like 1 | 0.04 | Orthogroups_2024-Update | |
| At1g28330 | No alias | Dormancy-associated protein 1... | 0.03 | Orthogroups_2024-Update | |
| PSME_00037206-RA | No alias | (at1g28330 : 94.4) dormancy-associated protein (DRM1);... | 0.02 | Orthogroups_2024-Update | |
| Seita.5G115800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.9G188100.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| CC | GO:0005576 | extracellular region | IEP | Predicted GO |
| CC | GO:0005618 | cell wall | IEP | Predicted GO |
| CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| CC | GO:0030286 | dynein complex | IEP | Predicted GO |
| CC | GO:0030312 | external encapsulating structure | IEP | Predicted GO |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
| CC | GO:0044422 | organelle part | IEP | Predicted GO |
| CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
| CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Predicted GO |
| CC | GO:0048046 | apoplast | IEP | Predicted GO |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Predicted GO |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008406 | DRM/ARP | 5 | 121 |
| No external refs found! |