1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G193500.1

Sobic.001G193500.1


Description : chaperone HSCA of mitochondrial ISC system transfer phase & chaperone component *(mtHSP70) of inner mitochondrion membrane TIM translocation system & chaperone *(mtHsc70))


Gene families : OG_42_0000096 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G193500.1
Cluster HCAA Clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
At5g28540 No alias Mediator of RNA polymerase II transcription subunit 37a... 0.03 Orthogroups_2024-Update
Brara.C01869.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01743.1 No alias chaperone HSCA of mitochondrial ISC system transfer... 0.03 Orthogroups_2024-Update
GRMZM2G106429 No alias heat shock cognate protein 70-1 0.03 Orthogroups_2024-Update
Kfl00460_0030 kfl00460_0030_v1.1 (q02028|hsp7s_pea : 999.0) Stromal 70 kDa heat... 0.02 Orthogroups_2024-Update
LOC_Os02g02410 No alias DnaK family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_817408g0010 No alias (p09189|hsp7c_pethy : 959.0) Heat shock cognate 70 kDa... 0.03 Orthogroups_2024-Update
PSME_00007414-RA No alias (q01899|hsp7m_phavu : 1033.0) Heat shock 70 kDa protein,... 0.03 Orthogroups_2024-Update
PSME_00051003-RA No alias (at3g12580 : 785.0) heat shock protein 70 (HSP70);... 0.04 Orthogroups_2024-Update
Potri.001G285500 No alias mitochondrial HSO70 2 0.03 Orthogroups_2024-Update
Potri.009G079700 No alias mitochondrial HSO70 2 0.03 Orthogroups_2024-Update
Pp1s526_2V6 No alias heat shock protein 70 0.02 Orthogroups_2024-Update
Pp1s59_239V6 No alias heat shock 70 kda protein 0.02 Orthogroups_2024-Update
Seita.3G327900.1 No alias chaperone *(Hsp70) 0.05 Orthogroups_2024-Update
Seita.9G191200.1 No alias chaperone HSCA of mitochondrial ISC system transfer... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 54 647
No external refs found!