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  5. Sobic.001G195550.1

Sobic.001G195550.1


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G195550.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Brara.A01084.1 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
Glyma.20G053500 No alias FAR1-related sequence 3 0.05 Orthogroups_2024-Update
LOC_Os08g20486 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc07g043270 No alias FAR1 (AHRD V3.3 *** A0A178UYQ0_ARATH) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 307 399
IPR004330 FAR1_DNA_bnd_dom 98 186
No external refs found!