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  5. Sobic.001G198300.1

Sobic.001G198300.1


Description : Unknown function


Gene families : OG_42_0001896 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001896_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G198300.1
Cluster HCAA Clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g26160 No alias hypothetical protein 0.03 Orthogroups_2024-Update
LOC_Os07g01300 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os10g31360 No alias GRF zinc finger family protein, expressed 0.02 Orthogroups_2024-Update
Sobic.001G256600.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010666 Znf_GRF 12 37
No external refs found!